However, we have also included some tertiary analyses like SNP detection and graphical identification of large scale genomic events.įor a full feature list, have a look here. Smoother handling of hybrid data sets (cross-platform, cross-experiment-design)Īlongside Genomics WB 2.0, we are also releasing a command line program package for de novo and reference assembly which will give users access to these tools in a scripting environment.A completely new short read assembler delivering the worlds fastest reference assembly – click here for more info and white paper.This includes the following improvements: Version 2.0 of the software is out in a few days, and for this release we have focused on bringing our Workbench to a state where it can comfortably handle human genome size data sets. This package is a separate product which includes the fast assembly algorithms and a number of utilities for handling assembly results. Improved detection of genome scale eventsįurther down the line we are looking at including features like.Advanced feature queries – feature tracks.Having established a firm basis for secondary analysis we have an ambitious roadmap for including more tertiary analysis tools later this year. However, although we intend to provide a very comprehensive tool set we know that we can not cover all applications there is. For this reason, we are focusing on providing an open industry-strength platform that users can modify and extend. For this reason we provide a Software Developer Kit which gives access to an extensive and well supported API and a developer community. I hope this was of help and please feel free to post any questions or comments to this that you may have.
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